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Commit 09daa326 authored by Johannes Wasmer's avatar Johannes Wasmer
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add bi2te3 viz with soap rcuts from sisclab22p6 for hds-lee-eval-poster

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soap_params_template = dict(
r_cut='template',
n_max='template',
l_max='template',
sigma='template',
rbf='gto',
weighting=None,
crossover=True,
average='inner',
species=global_species,
periodic=False,
sparse=False,
dtype='float64'
)
soap_params1 = soap_params_template.copy()
soap_params1.update(dict(
r_cut=2.0,
n_max=7,
l_max=6,
sigma=0.75
))
soap_params2 = soap_params_template.copy()
soap_params2.update(dict(
r_cut=4.0,
n_max=7,
l_max=6,
sigma=0.75
))
soap_params3 = soap_params_template.copy()
soap_params3.update(dict(
r_cut=16.0,
n_max=7,
l_max=6,
sigma=0.75
))
# kernels gauss gopt
gamma = 1.0/(2*1e-1**2)
train_test_split = 0.2
# kernel ridge
lamda = 1e-8 # regularization (lambda is a Python keyword)
maes, rows=soap1-3, columns=klin,kquad,kgauss,kgopt
0.2774131916924177 0.23972883617185559 0.2470158155265294 0.24710529251754
0.395749519196658 0.5223752406809169 0.11153731966195836 0.11070878105727575
0.09879230141180219 0.08647223108375492 0.07484704633814342 0.07519237869819785
r2s, rows=soap1-3, columns=klin,kquad,kgauss,kgopt
0.9478329302568231 0.9220328204910648 0.8891094499308915 0.8889533008884065
-0.879544152264141 -11.788609440700458 0.9381665739404782 0.9406498986952988
0.9569682696557926 0.9741412354770155 0.9424936360028437 0.9424786641700156
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