- Feb 28, 2016
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Jan Caron authored
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- Jul 21, 2015
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Jan Caron authored
Cleanup and documentation! ramp: New class for polynomial ramps. Instantiated in the ForwardModel. forwardmodel: Now uses new ramp class. phasemapper: Ramp functionality moved to ramp class. reconstruction: Ramp order not used, ramp can be now retrieved from the ramp class after reconstruction. analytic, magcreator: Better and consistent definition of pixel centers and their influence on the phase. testing: Minor corrections for new syntax.
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- Jun 02, 2015
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Jan Caron authored
Phase maps now also have a mask and a confidence matrix. Began new script structure (temporary folders created). Cleanup, logging and documentation done. config: NTHREADS is now set here. dataset: Method for creating 3D masks added. phasemap: Mask and confidence matrix added. Padding and cropping supported. forwardmodel: Stubs for multiprocessing added (next TODO!). kernel: Added support for perturbed reference wave. magdata: Padding and cropping supported. projector: New property 'sparsity' introduced. regularisator: Stub for ComboRegularisator added (next TODO!). tests: Changed accordingly.
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- Mar 07, 2015
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Jan Caron authored
magdata: added convenience functions for flipping and rotating of magnetic distributions, fixed bug with ar_dens. phasemap: now also has a mask which will be used to construct a 3D-mask for the magnetic distribution during reconstruction. Added setter/getter. Added copy(), scale_down()/scale_up() convenience functions. !CAUTION! Only NetCDF4 files save every new parameter! projector: Fixed hidden bug in X/YTiltProjector, which was problematic during tilts over 360°. Now uses linear algebra (much clearer!). get_info() function now can be used non-verbose (for filenames). dataset: added several setter/getter, addes set_3d_mask() for simple 2D tasks, renamed mask to confidence (for Se_inv construction) tests: updated to include the fixes and new functions introduced in this update!
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- Feb 20, 2015
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Jan Caron authored
magdata/phasemap: load and save methods now dynamically save with absolute and relative paths. Relative paths are defined in the config.py file!
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