Additional functionality for phasemap manipulation, masks and more plots.
phasemap: Now supports flips, rotations and shifts with ndimage. Added plot_phase_with_hist to plot histograms (for difference plots). fielddata: FieldData now properly plots contours and masks (new). dataset: set_3d_mask now uses the new mask capability of FieldData. Default is no longer "logical backprojection". io_phasemap: Now includes .tif (although that does not always work). setup.py: Deleted deprecated depencencies. Renamed a few plot commands to plot_... Rollback to RdBu as colormap (back from Spectral).
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- pyramid/dataset.py 23 additions, 40 deletionspyramid/dataset.py
- pyramid/fielddata.py 49 additions, 13 deletionspyramid/fielddata.py
- pyramid/file_io/io_phasemap.py 1 addition, 1 deletionpyramid/file_io/io_phasemap.py
- pyramid/phasemap.py 154 additions, 11 deletionspyramid/phasemap.py
- pyramid/projector.py 0 additions, 1 deletionpyramid/projector.py
- pyramid/utils/phasemap_creator.py 1 addition, 1 deletionpyramid/utils/phasemap_creator.py
- pyramid/utils/reconstruction_2d_from_phasemap.py 3 additions, 6 deletionspyramid/utils/reconstruction_2d_from_phasemap.py
- pyramid/utils/reconstruction_3d_from_magdata.py 3 additions, 3 deletionspyramid/utils/reconstruction_3d_from_magdata.py
- setup.py 2 additions, 3 deletionssetup.py
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