- Jul 30, 2015
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Jan Caron authored
forward_model: DistributedForwardModel created which uses the multiprocessing package for distributed computations.
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- Jul 16, 2015
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Jan Caron authored
colormap: New module with colormap subclass which has special functions to calculate directional rgb-colors, now used in many plots! __init__: On star import now also has abbreviations for a few modules. fwd_model: Now has flags for fitting an offset and/or ramp. CAUTION: will be moved next update to new class! magdata: Removed colorwheel stuff (all moved to 'colormap'). Overhaul of quiver plot in 2D and 3D. Now shows mask and uses new colormap for angular color coding. phasemap: Now uses the new colormap for holo plots. Removed color wheel (moved to the new class). Added function to add ramps. phasemapper: Now handles also offsets and ramps in the phase. CAUTION: will be moved next update to new class! projector: Fixed bugs in SimpleProjector. 1) leftmost pixels are no longer moved moved to left corner of padded projection (when dim_uv is not None). 2) odd padding when using dim_uv are now handled properly (one more pixel on top and right if necessary). costfunction: n is now taken from the fwd_model instead of the data_set. dataset: Introduced the count variable which gives the number of images. magcreator: In the process of updating, more on next commit. reconstruction: Also handles ramps and offsets now, properly extracts them after reconstruction. regularisator: New argument 'add_params' is used to cut off input (for offset and ramp) which are not used in the regularisation. scripts: several small changes...
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- Jun 02, 2015
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Jan Caron authored
Phase maps now also have a mask and a confidence matrix. Began new script structure (temporary folders created). Cleanup, logging and documentation done. config: NTHREADS is now set here. dataset: Method for creating 3D masks added. phasemap: Mask and confidence matrix added. Padding and cropping supported. forwardmodel: Stubs for multiprocessing added (next TODO!). kernel: Added support for perturbed reference wave. magdata: Padding and cropping supported. projector: New property 'sparsity' introduced. regularisator: Stub for ComboRegularisator added (next TODO!). tests: Changed accordingly.
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